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  5. Mp5g21020.1

Mp5g21020.1


Description : F-box protein SKIP1 OS=Arabidopsis thaliana (sp|q9fdx1|skip1_arath : 136.0)


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g21020.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00229380 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aev_g04631 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g18160 FBW2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08593 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Azfi_s0531.g075836 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Dac_g09947 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g03280 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Len_g15859 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Msp_g17144 FBW2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo410064 SKIP1 F-box protein SKIP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g122100.3.1 KAS2, ATKAS2,... 3-oxoacyl-[acyl-carrier-protein] synthase II,... 0.02 OrthoFinder output from all 47 species
Tin_g02614 SKIP1 substrate adaptor of SCF E3 ubiquiTin ligase complex &... 0.01 OrthoFinder output from all 47 species
Zm00001e015898_P003 FBW2, Zm00001e015898 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Zm00001e027535_P001 Zm00001e027535 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e039983_P001 Zm00001e039983 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 17 56
No external refs found!