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  5. Mp5g21970.1

Mp5g21970.1


Description : F-box protein SKIP1 OS=Arabidopsis thaliana (sp|q9fdx1|skip1_arath : 137.0)


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g21970.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00229380 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aspi01Gene01223.t1 SKIP1, Aspi01Gene01223 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os08g09470.1 LOC_Os08g09470 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os11g41860.1 LOC_Os11g41860 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g37816 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Tin_g45697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039983_P001 Zm00001e039983 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 82 122
No external refs found!