Aliases : CLPP2, NCLPP7
Description : ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis thaliana (sp|q9fn42|clpp2_arath : 288.0)
Gene families : OG0000552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000552_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cba_g04410 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020553.201 | NCLPP4, CLPP4 | ATP-dependent Clp protease proteolytic subunit 4,... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021522.2 | NCLPP1, CLPP5, NCLPP5 | ATP-dependent Clp protease proteolytic subunit 5,... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g02442 | CLPP2, NCLPP7 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g01926 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | HCCA |
| MF | GO:0019781 | NEDD8 activating enzyme activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0045116 | protein neddylation | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 45 | 225 |
| No external refs found! |
