Aliases : RPN5B
Description : regulatory component RPN5 of 26S proteasome
Gene families : OG0003644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003644_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp6g06620.1 | |
| Cluster | HCCA: Cluster_3 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00099p00018620 | RPN5B,... | Protein degradation.26S proteasome.regulatory... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G09900 | EMB2107, MSA, RPN5A | 26S proteasome regulatory subunit, putative (RPN5) | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g060241 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g082898 | EMB2107, MSA, RPN5A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g30391 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13431 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G039600.1 | RPN5B, Ceric.10G039600 | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z048700.1 | RPN5B, Ceric.1Z048700 | regulatory component *(RPN5) of 26S proteasome &... | 0.1 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021348.57 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.12 | OrthoFinder output from all 47 species | |
| Cre14.g632775 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.16 | OrthoFinder output from all 47 species | |
| Dcu_g14355 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01022276001 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_00178 | EMB2107, MSA, RPN5A | regulatory component RPN5 of 26S proteasome | 0.06 | OrthoFinder output from all 47 species | |
| Gb_00179 | RPN5B | regulatory component RPN5 of 26S proteasome | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g63430.1 | RPN5B, LOC_Os03g63430 | regulatory component RPN5 of 26S proteasome | 0.09 | OrthoFinder output from all 47 species | |
| Lfl_g28889 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10427293g0010 | RPN5B | regulatory component RPN5 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
| MA_10435598g0010 | EMB2107, MSA, RPN5A | regulatory component RPN5 of 26S proteasome | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g01635 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g08616 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17093 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g00574 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c10_9730V3.1 | RPN5B, Pp3c10_9730 | 26S proteasome regulatory subunit, putative (RPN5) | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0083.g018154 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24935 | No alias | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g051370.4.1 | RPN5B, Solyc04g051370 | regulatory component RPN5 of 26S proteasome | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g09767 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011647_P002 | RPN5B, Zm00001e011647 | regulatory component RPN5 of 26S proteasome | 0.12 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |
