Description : Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica (sp|q40648|kcab_orysj : 126.0)
Gene families : OG0001484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp6g07940.1 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G04420 | No alias | NAD(P)-linked oxidoreductase superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g060099 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g078790 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g09139 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g29463 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07984 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g01870 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0057.g034325 | No alias | not classified & original description: CDS=1-1113 | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001368.10 | No alias | Probable voltage-gated potassium channel subunit beta... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001368.12 | No alias | Probable voltage-gated potassium channel subunit beta... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021494.8 | No alias | Probable voltage-gated potassium channel subunit beta... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g01567 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01390 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g04575 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027822001 | No alias | Probable voltage-gated potassium channel subunit beta... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g42540.1 | LOC_Os11g42540 | Probable voltage-gated potassium channel subunit beta... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g11367 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g03611 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19934 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30698 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g09470 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g15671 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0079.g017772 | No alias | not classified & original description: CDS=67-1254 | 0.05 | OrthoFinder output from all 47 species | |
| Smo233927 | No alias | Probable voltage-gated potassium channel subunit beta... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g053600.4.1 | Solyc06g053600 | Probable voltage-gated potassium channel subunit beta... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e005118_P002 | Zm00001e005118 | Probable voltage-gated potassium channel subunit beta... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004827 | proline-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046164 | alcohol catabolic process | IEP | HCCA |
| BP | GO:0046174 | polyol catabolic process | IEP | HCCA |
| BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
| BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | HCCA |
| BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0071545 | inositol phosphate catabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023210 | NADP_OxRdtase_dom | 65 | 382 |
| No external refs found! |
