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  5. Mp6g17700.1

Mp6g17700.1


Description : aminoacyl-tRNA binding factor (eEF1A)


Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g17700.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g109078 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Ala_g09896 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Ala_g10935 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Als_g26660 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Aop_g20702 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene14473.t1 Aspi01Gene14473 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene56906.t1 Aspi01Gene56906 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Cba_g03670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08954 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Cba_g60017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G074900.1 Ceric.19G074900 not classified & original description: pacid=50576156... 0.03 OrthoFinder output from all 47 species
Len_g55835 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g17369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22816 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
MA_9512579g0020 No alias Elongation factor 1-alpha OS=Glycine max... 0.03 OrthoFinder output from all 47 species
Msp_g06564 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Msp_g38252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g55227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c2_6690V3.1 Pp3c2_6690 GTP binding Elongation factor Tu family protein 0.01 OrthoFinder output from all 47 species
Smo169717 No alias Protein biosynthesis.translation elongation.eEF1A... 0.03 OrthoFinder output from all 47 species
Solyc06g009970.3.1 Solyc06g009970 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
Solyc11g150146.1.1 Solyc11g150146 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
Spa_g24426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g33486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g40443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010555_P001 Zm00001e010555 aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 322 429
IPR000795 T_Tr_GTP-bd_dom 7 222
IPR004161 EFTu-like_2 248 313
No external refs found!