Aliases : EMB3011
Description : RNA helicase (Prp16)
Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00005p00234010 | evm_27.TU.AmTr_v1... | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00019p00154740 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.spliceosome... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00021p00166450 | evm_27.TU.AmTr_v1... | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00202360 | evm_27.TU.AmTr_v1... | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G26370 | No alias | RNA helicase family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G32490 | ESP3, EMB2733 | RNA helicase family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G47250 | No alias | RNA helicase family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G26560 | No alias | ATP-dependent RNA helicase, putative | 0.02 | OrthoFinder output from all 47 species | |
| AT4G18465 | No alias | RNA helicase family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G13010 | EMB3011 | RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g008210 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g014958 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g060167 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g107993 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g11422 | No alias | RNA helicase *(Prp22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g14188 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g27800 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g02597 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g01897 | No alias | RNA helicase *(Prp22) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04491 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g11041 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23007 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g19131 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g29988 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07221 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13922 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g15706 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g69620 | No alias | RNA helicase *(Prp22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0580.g078305 | No alias | not classified & original description: CDS=60-3857 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s2562.g112176 | No alias | not classified & original description: CDS=195-1934 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g04735 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g13014 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g73283 | MEE29 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.01G059500.1 | Ceric.01G059500 | not classified & original description: pacid=50591809... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.04G078700.1 | Ceric.04G078700 | not classified & original description: pacid=50630845... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.15G036900.1 | Ceric.15G036900 | RNA helicase *(Prp22) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.21G075900.1 | EMB3011, Ceric.21G075900 | RNA helicase *(Prp16) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.37G064800.1 | ESP3, EMB2733,... | RNA helicase *(Prp2) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000842.2 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000984.27 | ESP3, EMB2733 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021589.28 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.01 | OrthoFinder output from all 47 species | |
| Cre07.g349100 | ESP3, EMB2733 | RNA processing.RNA splicing.spliceosome... | 0.04 | OrthoFinder output from all 47 species | |
| Cre08.g358563 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g11433 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g16924 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g20233 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g30923 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g44524 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g13368 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g20664 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g22478 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g42294 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06989 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g18759 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g21445 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g25246 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021163001 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028153001 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029863001 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_11931 | No alias | RNA helicase (Prp22) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_14270 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_30670 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g11370.1 | LOC_Os01g11370 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g19860.1 | LOC_Os02g19860 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g09280.1 | LOC_Os06g09280 | RNA helicase (Prp22) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g32430.1 | EMB3011, LOC_Os07g32430 | RNA helicase (Prp16) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g24760.1 | ESP3, EMB2733,... | RNA helicase (Prp2) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g20554.1 | LOC_Os11g20554 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g01881 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g08915 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g09738 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g33083 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g57131 | EMB3011 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g08910 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g17092 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g34333 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_34468g0010 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.02 | OrthoFinder output from all 47 species | |
| MA_4084g0010 | HVT1, ATVT-1 | DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_629782g0010 | EMB3011 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g00692 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14081 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07572 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g10443 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g17219 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42980 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g42990 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g44705 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10948 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g18506 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g09947 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g26832 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g04698 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05341 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0047.g013414 | EMB3011 | RNA helicase *(Prp16) & original description: CDS=171-3614 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14599 | No alias | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16290 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16823 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g25079 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29503 | No alias | RNA helicase *(Prp22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g48742 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc01g079250.3.1 | Solyc01g079250 | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g115390.4.1 | ESP3, EMB2733,... | RNA helicase (Prp2) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g015040.4.1 | Solyc05g015040 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g039550.4.1 | Solyc07g039550 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g008120.4.1 | Solyc09g008120 | RNA helicase (Prp22) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g097820.3.1 | Solyc09g097820 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g076910.2.1 | EMB3011, Solyc10g076910 | RNA helicase (Prp16) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g12231 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g22116 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g25913 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02893 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001487_P003 | Zm00001e001487 | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014112_P001 | Zm00001e014112 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e016478_P002 | Zm00001e016478 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022095_P001 | ESP3, EMB2733,... | RNA helicase (Prp2) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028404_P001 | Zm00001e028404 | RNA helicase (Prp22) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036358_P005 | Zm00001e036358 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038305_P001 | Zm00001e038305 | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0004386 | helicase activity | IEA | Interproscan |
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043248 | proteasome assembly | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| MF | GO:0060090 | molecular adaptor activity | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |
