1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp7g05980.1

Mp7g05980.1 (LHCB2.3, LHCB2, LHCB2.4)


Aliases : LHCB2.3, LHCB2, LHCB2.4

Description : component LHCb1/2/3 of LHC-II complex


Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g05980.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00136650 LHCB1.5, LHB1B2,... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AMTR_s00045p00070890 CAB3, AB180,... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AMTR_s00076p00074970 LHCB1.3, CAB140,... Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. 0.06 OrthoFinder output from all 47 species
AMTR_s00088p00153020 LHCB2.3, LHCB2,... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00139960 LHCB5,... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
AMTR_s00153p00078810 LHCB3*1, LHCB3,... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AMTR_s00189p00032350 LHCB1.3, CAB140,... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AT4G10340 LHCB5 light harvesting complex of photosystem II 5 0.02 OrthoFinder output from all 47 species
Aev_g05066 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Aev_g28574 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Ala_g31527 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aob_g08215 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Aob_g13734 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g03622 LHCB2.2, LHCB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19772 LHCB1.4, LHB1B1 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene25498.t1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene28094.t1 LHCB2.2, LHCB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41853.t1 CAB3, AB180,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene44236.t1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene53662.t1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene62512.t1 LHCB2.1, LHCB2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71076.t1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0042.g026913 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0052.g031519 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Cba_g38988 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.05G101100.1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.12G001900.1 LHCB3*1, LHCB3,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G047900.1 LHCB1.4, LHB1B1,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.17G067600.1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.29G031100.1 LHCB1.5, LHB1B2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.32G021300.1 LHCB1.5, LHB1B2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.32G021800.1 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.37G024700.1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Cre06.g284250 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Cre12.g548400 LHCB2.2, LHCB2 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Dac_g18249 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Dac_g32133 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Dde_g16719 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01014439001 LHCB3*1, LHCB3 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Gb_23732 LHCB1.5, LHB1B2 component LHCb1/2/3 of LHC-II complex 0.04 OrthoFinder output from all 47 species
Len_g27642 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
MA_10431300g0020 LHCB2.2, LHCB2 component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
MA_267089g0010 LHCB2.1, LHCB2 Chlorophyll a-b binding protein type I, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_97315g0010 LHCB1.5, LHB1B2 component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Msp_g07353 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Msp_g07354 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Msp_g08156 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Nbi_g10111 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Ore_g21027 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ore_g32299 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ore_g41462 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Pp3c18_8100V3.1 LHCB2.3, LHCB2,... photosystem II light harvesting complex gene 2.1 0.01 OrthoFinder output from all 47 species
Pp3c2_36190V3.1 LHCB2.3, LHCB2,... photosystem II light harvesting complex gene 2.1 0.03 OrthoFinder output from all 47 species
Pp3c2_36220V3.1 LHCB2.3, LHCB2,... photosystem II light harvesting complex gene 2.1 0.03 OrthoFinder output from all 47 species
Pp3c2_36500V3.1 LHCB2.3, LHCB2,... photosystem II light harvesting complex gene 2.1 0.03 OrthoFinder output from all 47 species
Pp3c5_7150V3.1 LHCB2.3, LHCB2,... photosystem II light harvesting complex gene 2.1 0.02 OrthoFinder output from all 47 species
Pp3c6_6830V3.1 LHCB2.2, LHCB2,... photosystem II light harvesting complex gene 2.1 0.01 OrthoFinder output from all 47 species
Ppi_g30637 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g34227 LHCB2.3, LHCB2, LHCB2.4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39667 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g54860 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Solyc02g070970.1.1 LHCB1.3, CAB140,... component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Solyc02g070980.1.1 LHCB1.3, CAB140,... component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Solyc02g070990.1.1 LHCB1.3, CAB140,... component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Solyc03g005760.1.1 LHCB1.3, CAB140,... component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Solyc06g063370.3.1 LHCB5, Solyc06g063370 component LHCb5 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Tin_g06849 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Tin_g12536 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Tin_g15266 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Tin_g23329 LHCB1.3, CAB140,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 66 231
No external refs found!