Aliases : RH8, ATRH8
Description : DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica (sp|q7xmk8|rh6_orysj : 768.0)
Gene families : OG0001822 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001822_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G61240 | No alias | DEA(D/H)-box RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G00660 | RH8, ATRH8 | RNAhelicase-like 8 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012833 | RH8, ATRH8 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g075137 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02069 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009123 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0359.g066836 | No alias | DDX6-type mRNA helicase *(RH12/RH8) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g11864 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g72326 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G064200.1 | RH8, ATRH8,... | DDX6-type mRNA helicase *(RH12/RH8) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001086.7 | RH8, ATRH8 | DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g00876 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08850 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019787001 | RH8, ATRH8 | DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g45040.3 | RH8, ATRH8,... | DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g35990.2 | RH8, ATRH8,... | DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g02022 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g03846 | No alias | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pp3s121_40V3.1 | RH8, ATRH8, Pp3s121_40 | RNAhelicase-like 8 | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g12186 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007974 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18112 | No alias | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24921 | No alias | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g094350.4.1 | RH8, ATRH8,... | DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g017530.3.1 | RH8, ATRH8,... | DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02032 | RH8, ATRH8 | DDX6-type mRNA helicase *(RH12/RH8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e004416_P001 | RH8, ATRH8,... | DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015237_P002 | RH8, ATRH8,... | DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| No external refs found! |
