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  5. Mp7g15330.1

Mp7g15330.1


Description : Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana (sp|q9sry4|lpa1_arath : 113.0)


Gene families : OG0007862 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g15330.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00129550 evm_27.TU.AmTr_v1... Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT4G28740 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species
Adi_g007087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70838.t1 Aspi01Gene70838 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0092.g042977 No alias not classified & original description: CDS=66-1103 0.05 OrthoFinder output from all 47 species
Ceric.32G001900.1 Ceric.32G001900 not classified & original description: pacid=50598721... 0.05 OrthoFinder output from all 47 species
Cre06.g266900 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dac_g07193 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g16984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430747g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g39606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g00347 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g10680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013941 No alias not classified & original description: CDS=1-1122 0.03 OrthoFinder output from all 47 species
Sam_g11106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00565 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021883 LPA1-like 103 179
No external refs found!