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  5. Mp8g11720.1

Mp8g11720.1 (RUB1, ATRUB1, NEDD8)


Aliases : RUB1, ATRUB1, NEDD8

Description : Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana (sp|q9she7|rub1_arath : 176.0)


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g11720.1

Target Alias Description ECC score Gene Family Method Actions
AT2G35635 UBQ7, RUB2 ubiquitin 7 0.03 OrthoFinder output from all 47 species
Adi_g023730 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aev_g05687 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08351 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g16439 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23080.t1 UBQ11, Aspi01Gene23080 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G071300.1 UBQ14, Ceric.12G071300 UBQ ubiquitin-fold protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.20G068800.1 UBQ14, Ceric.20G068800 UBQ ubiquitin-fold protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.21G057400.1 UBQ6, Ceric.21G057400 component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ceric.29G038100.1 UBQ11, Ceric.29G038100 not classified & original description: pacid=50625725... 0.02 OrthoFinder output from all 47 species
Lfl_g28234 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_6985771g0010 No alias Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
MA_9129425g0010 No alias component RPL40 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Msp_g06697 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Msp_g07973 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g33621 UBQ7, RUB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g50366 UBQ6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g008590.4.1 Solyc08g008590 component RPL40 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Spa_g29979 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g34858 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29049 UBQ14 UBQ ubiquiTin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 78 149
IPR000626 Ubiquitin-like_dom 3 73
No external refs found!