Aliases : TAF15
Description : component TAF15 of TFIId basal transcription regulation complex
Gene families : OG0003584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003584_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp8g16600.1 | |
| Cluster | HCCA: Cluster_56 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00107550 | TAF15,... | RNA biosynthesis.RNA polymerase II-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g056343 | TAF15 | component *(TAF15) of TFIId basal transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g10105 | TAF15 | component *(TAF15) of TFIId basal transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G036100.1 | TAF15, Ceric.10G036100 | component *(TAF15) of TFIId basal transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000194.52 | TAF15 | RNA biosynthesis.RNA polymerase II-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g19815 | TAF15 | component *(TAF15) of TFIId basal transcription... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010206001 | TAF15 | RNA biosynthesis.RNA polymerase II-dependent... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_28670 | TAF15 | component TAF15 of TFIId basal transcription regulation complex | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g19560.1 | TAF15, LOC_Os07g19560 | component TAF15 of TFIId basal transcription regulation complex | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g12800.1 | TAF15, LOC_Os09g12800 | component TAF15 of TFIId basal transcription regulation complex | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g07319 | TAF15 | component *(TAF15) of TFIId basal transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g08780 | TAF15 | component *(TAF15) of TFIId basal transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g040050.3.1 | TAF15, Solyc11g040050 | component TAF15 of TFIId basal transcription regulation complex | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e010307_P004 | TAF15, Zm00001e010307 | component TAF15 of TFIId basal transcription regulation complex | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e034916_P002 | TAF15, Zm00001e034916 | component TAF15 of TFIId basal transcription regulation complex | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |
