Description : component CPFS5/CFIm25 of Cleavage Factor I (CF-Im) complex
Gene families : OG0003646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003646_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g06407 | No alias | component *(CPFS5/CFIm25) of Cleavage Factor I (CF-Im)... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G084000.1 | Ceric.09G084000 | component *(CPFS5/CFIm25) of Cleavage Factor I (CF-Im)... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021348.73 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.01 | OrthoFinder output from all 47 species | |
| Cre10.g462700 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os04g58640.1 | LOC_Os04g58640 | component CPFS5/CFIm25 of Cleavage Factor I (CF-Im) complex | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12325 | No alias | component *(CPFS5/CFIm25) of Cleavage Factor I (CF-Im)... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g009620.3.1 | Solyc01g009620 | component CPFS5/CFIm25 of Cleavage Factor I (CF-Im) complex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041963_P001 | Zm00001e041963 | component CPFS5/CFIm25 of Cleavage Factor I (CF-Im) complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003729 | mRNA binding | IEA | Interproscan |
| CC | GO:0005849 | mRNA cleavage factor complex | IEA | Interproscan |
| BP | GO:0006378 | mRNA polyadenylation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008192 | RNA guanylyltransferase activity | IEP | HCCA |
| MF | GO:0008193 | tRNA guanylyltransferase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0070568 | guanylyltransferase activity | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016706 | Cleav_polyA_spec_factor_su5 | 6 | 193 |
| No external refs found! |
