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  5. MpVg00970.1

MpVg00970.1


Description : No annotation


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MpVg00970.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00185510 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G40490 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 OrthoFinder output from all 47 species
Adi_g017512 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g018550 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g022493 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g054784 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g054785 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g058415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088264 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g107999 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g112695 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g05289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09693 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g15473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33385 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.14G063200.1 Ceric.14G063200 not classified & original description: pacid=50633319... 0.02 OrthoFinder output from all 47 species
Ceric.35G060600.1 Ceric.35G060600 not classified & original description: pacid=50581737... 0.05 OrthoFinder output from all 47 species
Cre07.g330300 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g15186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_16979 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os06g37000.2 LOC_Os06g37000 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g39560.3 LOC_Os07g39560 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g08078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09242 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_13606g0010 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g10695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g41545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014264 No alias not classified & original description: CDS=1-1203 0.03 OrthoFinder output from all 47 species
Sam_g07384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g42376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g43581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e032753_P002 Zm00001e032753 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e033045_P001 Zm00001e033045 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 108 166
IPR000504 RRM_dom 8 75
No external refs found!