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  5. Mpzg00380.1

Mpzg00380.1 (YCF4)


Aliases : YCF4

Description : YCF4 protein involved in PS-I assembly


Gene families : OG0009318 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009318_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mpzg00380.1
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
ATCG00520 YCF4 unfolded protein binding 0.04 OrthoFinder output from all 47 species
Aev_g15963 YCF4 protein involved in PS-I assembly *(YCF4) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000196 No alias not classified & original description: CDS=1-402 0.02 OrthoFinder output from all 47 species
Ceric.05G050000.1 YCF4, Ceric.05G050000 protein involved in PS-I assembly *(YCF4) & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G033700.1 YCF4, Ceric.29G033700 protein involved in PS-I assembly *(YCF4) & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G022400.1 YCF4, Ceric.33G022400 protein involved in PS-I assembly *(YCF4) & original... 0.08 OrthoFinder output from all 47 species
Ceric.38G006800.1 YCF4, Ceric.38G006800 protein involved in PS-I assembly *(YCF4) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01030619001 YCF4 Photosystem I assembly protein Ycf4 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
Gb_22391 YCF4 YCF4 protein involved in PS-I assembly 0.07 OrthoFinder output from all 47 species
LOC_Os02g24604.1 YCF4, LOC_Os02g24604 YCF4 protein involved in PS-I assembly 0.02 OrthoFinder output from all 47 species
LOC_Os06g39744.1 YCF4, LOC_Os06g39744 YCF4 protein involved in PS-I assembly 0.02 OrthoFinder output from all 47 species
Solyc00g500019.1.1 YCF4, Solyc00g500019 Photosystem I assembly protein Ycf4 OS=Solanum tuberosum... 0.02 OrthoFinder output from all 47 species
Solyc00g500066.1.1 YCF4, Solyc00g500066 Photosystem I assembly protein Ycf4 OS=Solanum tuberosum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR003359 PSI_Ycf4_assembly 7 183
No external refs found!