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  5. Mpzg00730.1

Mpzg00730.1


Description : component psRPS11 of small ribosomal subunit proteome


Gene families : OG0004584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mpzg00730.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
ATCG00750 RPS11 ribosomal protein S11 0.06 OrthoFinder output from all 47 species
Aev_g01915 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Aev_g37240 RPS11 component *(uS11c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Als_g62775 RPS11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0027.g023689 No alias not classified & original description: CDS=1-321 0.02 OrthoFinder output from all 47 species
Cba_g15340 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ceric.05G042000.1 RPS11, Ceric.05G042000 component *(uS11c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.05G049400.1 RPS11, Ceric.05G049400 component *(uS11c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ceric.1Z122600.1 RPS11, Ceric.1Z122600 not classified & original description: pacid=50617110... 0.03 OrthoFinder output from all 47 species
Ceric.1Z196300.1 RPS11, Ceric.1Z196300 not classified & original description: pacid=50586509... 0.03 OrthoFinder output from all 47 species
Ceric.1Z237100.1 RPS11, Ceric.1Z237100 not classified & original description: pacid=50569351... 0.03 OrthoFinder output from all 47 species
Dcu_g39431 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Dde_g49431 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Gb_08606 NFD3 component mtRPS11 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
LOC_Os04g16838.1 RPS11, LOC_Os04g16838 component psRPS11 of small ribosomal subunit proteome 0.14 OrthoFinder output from all 47 species
LOC_Os10g21332.1 RPS11, LOC_Os10g21332 component psRPS11 of small ribosomal subunit proteome 0.14 OrthoFinder output from all 47 species
Nbi_g20255 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Pir_g07424 RPS11 not classified & original description: none 0.13 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008794 No alias not classified & original description: CDS=1-249 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011050 No alias not classified & original description: CDS=1-261 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018183 No alias not classified & original description: CDS=1-513 0.03 OrthoFinder output from all 47 species
Solyc00g500030.1.1 RPS11, Solyc00g500030 component psRPS11 of small ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species
Solyc00g500075.1.1 RPS11, Solyc00g500075 component psRPS11 of small ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species
Spa_g02162 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Tin_g21094 RPS11 component *(uS11m) of small mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001971 Ribosomal_S11 20 129
No external refs found!