Pp3c10_22890V3.1 (GHS1, Pp3c10_22890)

Aliases : GHS1, Pp3c10_22890

Description : Ribosomal protein S21 family protein

Gene families : OG0004103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004103_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c10_22890V3.1
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AT3G27160	GHS1	Ribosomal protein S21 family protein	0.02	OrthoFinder output from all 47 species
Aop_g18482	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Cba_g02864	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.13G030700.1	Ceric.13G030700	component *(bS21c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Cre01.g017300	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Dac_g01906	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Dcu_g41032	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Ehy_g00353	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
LOC_Os02g09590.1	GHS1, LOC_Os02g09590	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.02	OrthoFinder output from all 47 species
MA_249305g0010	No alias	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.01	OrthoFinder output from all 47 species
Mp4g21580.1	No alias	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.03	OrthoFinder output from all 47 species
Pnu_g10832	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Smo444102	No alias	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
Spa_g18473	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Tin_g07965	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Zm00001e013920_P001	GHS1, Zm00001e013920	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.04	OrthoFinder output from all 47 species
Zm00001e025066_P001	GHS1, Zm00001e025066	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004834	tryptophan synthase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006568	tryptophan metabolic process	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006586	indolalkylamine metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0042430	indole-containing compound metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001911	Ribosomal_S21	83	136

External Links

No external refs found!

Pp3c10_22890V3.1 (GHS1, Pp3c10_22890)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation