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  5. Pp3c10_25280V3.1

Pp3c10_25280V3.1 (EMB2780, Pp3c10_25280)


Aliases : EMB2780, Pp3c10_25280

Description : DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases


Gene families : OG0002006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_25280V3.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene70665.t1 EMB2780, Aspi01Gene70665 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72661.t1 ATREV3, REV3,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g02107 EMB2780 EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Cba_g12027 EMB2780 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020539.8 EMB2780 DNA polymerase delta catalytic subunit OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Pp3c10_11570V3.1 EMB2780, Pp3c10_11570 DNA binding;nucleotide binding;nucleic acid... 0.02 OrthoFinder output from all 47 species
Pp3c11_14490V3.1 Pp3c11_14490 DNA binding;nucleotide binding;nucleic acid... 0.02 OrthoFinder output from all 47 species
Pp3c13_14630V3.1 EMB2780, Pp3c13_14630 DNA binding;nucleotide binding;nucleic acid... 0.07 OrthoFinder output from all 47 species
Pp3c14_3970V3.1 Pp3c14_3970 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c15_13750V3.1 Pp3c15_13750 DNA binding;nucleotide binding;nucleic acid... 0.05 OrthoFinder output from all 47 species
Pp3c16_6050V3.1 EMB2780, Pp3c16_6050 DNA binding;nucleotide binding;nucleic acid... 0.03 OrthoFinder output from all 47 species
Pp3c1_290V3.1 EMB2780, Pp3c1_290 DNA binding;nucleotide binding;nucleic acid... 0.06 OrthoFinder output from all 47 species
Pp3c25_2990V3.1 EMB2780, Pp3c25_2990 DNA binding;nucleotide binding;nucleic acid... 0.03 OrthoFinder output from all 47 species
Pp3c2_18826V3.1 Pp3c2_18826 DNA binding;nucleotide binding;nucleic acid... 0.02 OrthoFinder output from all 47 species
Pp3c2_390V3.1 EMB2780, Pp3c2_390 DNA binding;nucleotide binding;nucleic acid... 0.03 OrthoFinder output from all 47 species
Pp3c4_24900V3.1 Pp3c4_24900 No annotation 0.05 OrthoFinder output from all 47 species
Pp3c6_15720V3.1 EMB2780, Pp3c6_15720 DNA binding;nucleotide binding;nucleic acid... 0.03 OrthoFinder output from all 47 species
Pp3c9_12701V3.1 EMB2780, Pp3c9_12701 DNA binding;nucleotide binding;nucleic acid... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006134 DNA-dir_DNA_pol_B_multi_dom 323 692
IPR006133 DNA-dir_DNA_pol_B_exonuc 22 247
No external refs found!