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  5. Pp3c13_2440V3.1

Pp3c13_2440V3.1 (Pp3c13_2440)


Aliases : Pp3c13_2440

Description : EF hand calcium-binding protein family


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_2440V3.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g00912 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.18G075900.1 Ceric.18G075900 calcium sensor *(CML) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.18G076000.1 Ceric.18G076000 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Gb_03900 CML23 Probable calcium-binding protein CML25 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g12526 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 35 94
IPR002048 EF_hand_dom 118 180
No external refs found!