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  5. Pp3c14_16110V3.1

Pp3c14_16110V3.1 (CRR22, Pp3c14_16110)


Aliases : CRR22, Pp3c14_16110

Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_16110V3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G48910 LPA66 Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g004333 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g013701 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g068892 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g22832 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene43974.t1 REME1, Aspi01Gene43974 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G076200.1 Ceric.05G076200 not classified & original description: pacid=50577509... 0.02 OrthoFinder output from all 47 species
Ceric.07G067300.1 Ceric.07G067300 not classified & original description: pacid=50625994... 0.01 OrthoFinder output from all 47 species
Ceric.09G087400.1 Ceric.09G087400 not classified & original description: pacid=50586781... 0.01 OrthoFinder output from all 47 species
Ceric.10G030000.1 Ceric.10G030000 not classified & original description: pacid=50612250... 0.01 OrthoFinder output from all 47 species
Ceric.14G073700.1 Ceric.14G073700 not classified & original description: pacid=50633781... 0.01 OrthoFinder output from all 47 species
Ceric.15G077000.1 EMB2261, Ceric.15G077000 not classified & original description: pacid=50639459... 0.01 OrthoFinder output from all 47 species
Ceric.18G077400.1 Ceric.18G077400 not classified & original description: pacid=50622022... 0.01 OrthoFinder output from all 47 species
Ceric.32G042800.1 Ceric.32G042800 not classified & original description: pacid=50598173... 0.01 OrthoFinder output from all 47 species
Ceric.39G008600.1 Ceric.39G008600 not classified & original description: pacid=50582334... 0.01 OrthoFinder output from all 47 species
Dcu_g07647 OTP82 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g07680 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g34324 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g45856 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01008015001 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.01 OrthoFinder output from all 47 species
GSVIVT01022230001 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.01 OrthoFinder output from all 47 species
GSVIVT01029382001 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
LOC_Os03g64370.1 LOC_Os03g64370 Pentatricopeptide repeat-containing protein At5g52850,... 0.01 OrthoFinder output from all 47 species
Len_g05370 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07101 OTP86 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07668 OTP82 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10426261g0020 CRR22 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
MA_189553g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_39595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Msp_g13188 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g14800 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g24509 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g28348 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g28517 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g34510 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g37543 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g47843 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g06231 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g17174 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g25215 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g28389 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g30030 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g63493 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo86162 CRR2 Pentatricopeptide repeat-containing protein At4g14820... 0.01 OrthoFinder output from all 47 species
Solyc02g084830.4.1 Solyc02g084830 Pentatricopeptide repeat-containing protein At5g44230... 0.01 OrthoFinder output from all 47 species
Solyc04g063300.3.1 Solyc04g063300 Pentatricopeptide repeat-containing protein At3g26540... 0.01 OrthoFinder output from all 47 species
Solyc12g096510.3.1 Solyc12g096510 Pentatricopeptide repeat-containing protein At5g66520... 0.01 OrthoFinder output from all 47 species
Spa_g01489 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g05915 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g14021 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g17157 REME1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g19369 REME1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g20475 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g21818 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g23547 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g24508 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g25906 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g27693 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g30672 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g44341 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g56176 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 601 625
IPR002885 Pentatricopeptide_repeat 96 119
IPR002885 Pentatricopeptide_repeat 197 217
IPR032867 DYW_dom 700 823
IPR002885 Pentatricopeptide_repeat 425 471
IPR002885 Pentatricopeptide_repeat 324 371
IPR002885 Pentatricopeptide_repeat 121 169
IPR002885 Pentatricopeptide_repeat 526 573
IPR002885 Pentatricopeptide_repeat 223 269
No external refs found!