Pp3c15_4370V3.1 (Pp3c15_4370)

Aliases : Pp3c15_4370

Description : Zinc-binding ribosomal protein family protein

Gene families : OG0002755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002755_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c15_4370V3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00029660	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
AT1G52300	No alias	Zinc-binding ribosomal protein family protein	0.06	OrthoFinder output from all 47 species
AT3G16080	No alias	Zinc-binding ribosomal protein family protein	0.07	OrthoFinder output from all 47 species
Ala_g31967	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Aob_g02563	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Aop_g18943	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aop_g22710	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g28619	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g67698	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Azfi_s0375.g067257	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cba_g68198	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ceric.13G060700.1	Ceric.13G060700	component *(eL37) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Cre10.g430400	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.09	OrthoFinder output from all 47 species
Dac_g40440	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Dac_g42769	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ehy_g01950	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01017081001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
GSVIVT01035677001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Gb_29003	No alias	component RPL37 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Gb_33514	No alias	component RPL37 of LSU proteome component	0.07	OrthoFinder output from all 47 species
LOC_Os02g56990.1	LOC_Os02g56990	component RPL37 of LSU proteome component	0.07	OrthoFinder output from all 47 species
LOC_Os08g03450.1	LOC_Os08g03450	component RPL37 of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_7294534g0010	No alias	component RPL37 of LSU proteome component	0.02	OrthoFinder output from all 47 species
MA_741492g0010	No alias	component RPL37 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Mp2g12400.1	No alias	component RPL37 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Pp3c21_9910V3.1	Pp3c21_9910	Zinc-binding ribosomal protein family protein	0.05	OrthoFinder output from all 47 species
Ppi_g23003	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020090	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Solyc03g120780.3.1	Solyc03g120780	component RPL37 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Solyc06g066660.4.1	Solyc06g066660	component RPL37 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Solyc08g068180.3.1	Solyc08g068180	component RPL37 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Spa_g37746	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Zm00001e001908_P001	Zm00001e001908	component RPL37 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Zm00001e013434_P001	Zm00001e013434	component RPL37 of LSU proteome component	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005742	mitochondrial outer membrane translocase complex	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	HCCA
BP	GO:0006839	mitochondrial transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
BP	GO:0030150	protein import into mitochondrial matrix	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
CC	GO:0061617	MICOS complex	IEP	HCCA
BP	GO:0065002	intracellular protein transmembrane transport	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0070585	protein localization to mitochondrion	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0071806	protein transmembrane transport	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098799	outer mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA
BP	GO:1990542	mitochondrial transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001569	Ribosomal_L37e	2	53

External Links

No external refs found!

Pp3c15_4370V3.1 (Pp3c15_4370)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation