Aliases : RPS18A, PFL, PFL1, Pp3c16_2090
Description : Ribosomal protein S13/S18 family
Gene families : OG0001648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001648_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00078p00178430 | RPS18A, PFL,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.11 | OrthoFinder output from all 47 species | |
| AT1G22780 | RPS18A, PFL, PFL1 | Ribosomal protein S13/S18 family | 0.13 | OrthoFinder output from all 47 species | |
| AT1G34030 | No alias | Ribosomal protein S13/S18 family | 0.1 | OrthoFinder output from all 47 species | |
| AT4G09800 | RPS18C | S18 ribosomal protein | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g028863 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g079654 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g104498 | RPS18A, PFL, PFL1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g110360 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g04649 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g07943 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Azfi_s0094.g043510 | RPS18A, PFL, PFL1 | not classified & original description: CDS=1-351 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0157.g053803 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Azfi_s0393.g067809 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Ceric.06G075100.1 | RPS18A, PFL,... | component *(uS13) of small ribosomal-subunit (SSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.25G059000.1 | RPS18A, PFL,... | component *(uS13) of small ribosomal-subunit (SSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Cre06.g272950 | RPS18A, PFL, PFL1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.27 | OrthoFinder output from all 47 species | |
| Dac_g30011 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.16 | OrthoFinder output from all 47 species | |
| Dcu_g07903 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.16 | OrthoFinder output from all 47 species | |
| Dcu_g29531 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Dde_g34947 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01017975001 | RPS18A, PFL, PFL1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.16 | OrthoFinder output from all 47 species | |
| GSVIVT01034582001 | RPS18A, PFL, PFL1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g58050.1 | RPS18A, PFL,... | component RPS18 of SSU proteome | 0.22 | OrthoFinder output from all 47 species | |
| LOC_Os07g07709.1 | RPS18A, PFL,... | component RPS18 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Len_g15493 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g09543 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g16499 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g23484 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g29343 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g31910 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g33612 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10429265g0010 | RPS18A, PFL, PFL1 | component RPS18 of SSU proteome | 0.18 | OrthoFinder output from all 47 species | |
| MA_10431843g0010 | RPS18A, PFL, PFL1 | component RPS18 of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| Mp1g07420.1 | RPS18A, PFL, PFL1 | component RPS18 of SSU proteome | 0.24 | OrthoFinder output from all 47 species | |
| Mp5g02820.1 | RPS18A, PFL, PFL1 | component RPS18 of SSU proteome | 0.24 | OrthoFinder output from all 47 species | |
| Msp_g30950 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g34156 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g05557 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g06073 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06074 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g07726 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g17989 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g52860 | RPS18A, PFL, PFL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01607 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g22724 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g24083 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Ppi_g51619 | RPS18A, PFL, PFL1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g11517 | No alias | component *(uS13) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g32254 | No alias | component *(uS13) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g35155 | No alias | component *(uS13) of small ribosomal-subunit (SSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Smo267619 | RPS18A, PFL, PFL1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc03g078290.3.1 | RPS18A, PFL,... | component RPS18 of SSU proteome | 0.22 | OrthoFinder output from all 47 species | |
| Solyc06g073370.4.1 | RPS18A, PFL,... | component RPS18 of SSU proteome | 0.13 | OrthoFinder output from all 47 species | |
| Solyc11g005680.2.1 | RPS18A, PFL,... | component RPS18 of SSU proteome | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g10602 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.18 | OrthoFinder output from all 47 species | |
| Spa_g10603 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g35731 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g40316 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.18 | OrthoFinder output from all 47 species | |
| Tin_g22509 | RPS18A, PFL, PFL1 | component *(uS13) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g37120 | RPS18A, PFL, PFL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005967_P001 | RPS18A, PFL,... | component RPS18 of SSU proteome | 0.26 | OrthoFinder output from all 47 species | |
| Zm00001e011880_P001 | RPS18A, PFL,... | component RPS18 of SSU proteome | 0.21 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001892 | Ribosomal_S13 | 14 | 142 |
| No external refs found! |
