Aliases : Pp3c16_7260
Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c16_7260V3.1 | |
| Cluster | HCCA: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00022p00252730 | evm_27.TU.AmTr_v1... | No description available | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00122220 | evm_27.TU.AmTr_v1... | No description available | 0.01 | OrthoFinder output from all 47 species | |
| AT2G41990 | No alias | CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant... | 0.01 | OrthoFinder output from all 47 species | |
| AT3G08490 | No alias | BEST Arabidopsis thaliana protein match is: Late... | 0.01 | OrthoFinder output from all 47 species | |
| AT3G24605 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| AT4G35170 | No alias | Late embryogenesis abundant (LEA) hydroxyproline-rich... | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g16993 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g15575 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g00399 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g12485 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene39024.t1 | Aspi01Gene39024 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_00802 | No alias | microtubule-interacting component CC of cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_09110 | No alias | microtubule-interacting component CC of cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_38619 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g44740.1 | LOC_Os02g44740 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g59330.1 | LOC_Os04g59330 | microtubule-interacting component CC of cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g08351 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_10227167g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g12420 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g29304 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g32935 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g01283 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02766 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g62547 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g008965 | No alias | not classified & original description: CDS=1104-2096 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0086.g018396 | No alias | not classified & original description: CDS=285-692 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g078750.3.1 | Solyc04g078750 | microtubule-interacting component CC of cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g07963 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g15181 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e000854_P001 | Zm00001e000854 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030085_P001 | Zm00001e030085 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
