Aliases : Pp3c17_14060
Description : Ribosomal L28e protein family
Gene families : OG0000910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000910_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00036p00210210 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | OrthoFinder output from all 47 species | |
| AT2G19730 | No alias | Ribosomal L28e protein family | 0.3 | OrthoFinder output from all 47 species | |
| AT4G29410 | No alias | Ribosomal L28e protein family | 0.28 | OrthoFinder output from all 47 species | |
| Adi_g025175 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g025176 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g025177 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g029567 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g073738 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g03520 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g00426 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Als_g19634 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23593 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Als_g30166 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g41189 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g35789 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g37483 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g00977 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.17 | OrthoFinder output from all 47 species | |
| Aop_g66247 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0191.g057028 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g69046 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.25G035500.1 | Ceric.25G035500 | component *(eL28) of large ribosomal-subunit (LSU)... | 0.21 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020710.93 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Cre11.g467578 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.26 | OrthoFinder output from all 47 species | |
| Dac_g03084 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g26158 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g14613 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g27550 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g08723 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03161 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016895001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.24 | OrthoFinder output from all 47 species | |
| GSVIVT01035350001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_38783 | No alias | component RPL28 of LSU proteome component | 0.15 | OrthoFinder output from all 47 species | |
| LOC_Os01g51020.1 | LOC_Os01g51020 | component RPL28 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g57540.1 | LOC_Os02g57540 | component RPL28 of LSU proteome component | 0.24 | OrthoFinder output from all 47 species | |
| LOC_Os05g46430.1 | LOC_Os05g46430 | component RPL28 of LSU proteome component | 0.19 | OrthoFinder output from all 47 species | |
| Len_g16638 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g00141 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g24992 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10428490g0010 | No alias | component RPL28 of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
| Mp1g26940.1 | No alias | component RPL28 of LSU proteome component | 0.23 | OrthoFinder output from all 47 species | |
| Msp_g10686 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g36633 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g38772 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g38943 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g01990 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g33242 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g05983 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03637 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g60467 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g62486 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g11024 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g14043 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g19107 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g19271 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g25867 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g34867 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0275.g027057 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g05292 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g05465 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g05602 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g06118 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g06119 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g14505 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g18296 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g31428 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g31492 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g37199 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g43777 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g46661 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g48404 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo164298 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Solyc03g121330.3.1 | Solyc03g121330 | component RPL28 of LSU proteome component | 0.23 | OrthoFinder output from all 47 species | |
| Solyc06g062500.4.1 | Solyc06g062500 | component RPL28 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Solyc12g044720.2.1 | Solyc12g044720 | component RPL28 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g19251 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.15 | OrthoFinder output from all 47 species | |
| Spa_g21825 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.19 | OrthoFinder output from all 47 species | |
| Spa_g36712 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g35509 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Tin_g40565 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e026410_P001 | Zm00001e026410 | component RPL28 of LSU proteome component | 0.24 | OrthoFinder output from all 47 species | |
| Zm00001e032283_P002 | Zm00001e032283 | component RPL28 of LSU proteome component | 0.29 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR029004 | L28e/Mak16 | 8 | 127 |
| No external refs found! |
