Pp3c19_13670V3.1 (CHS, TT4, ATCHS, Pp3c19_13670)


Aliases : CHS, TT4, ATCHS, Pp3c19_13670

Description : Chalcone and stilbene synthase family protein


Gene families : OG0000113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_13670V3.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Als_g02467 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18395 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15873.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37175.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37176.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37177.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37178.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43977.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43985.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44026.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene60636.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene60637.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene60638.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene60639.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene60640.t1 CHS, TT4, ATCHS,... EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g28271 LAP6 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06700 No alias Enzyme classification.EC_2 transferases.EC_2.3... 0.02 OrthoFinder output from all 47 species
Gb_26726 CHS, TT4, ATCHS Enzyme classification.EC_2 transferases.EC_2.3... 0.01 OrthoFinder output from all 47 species
Gb_28161 CHS, TT4, ATCHS Enzyme classification.EC_2 transferases.EC_2.3... 0.07 OrthoFinder output from all 47 species
Msp_g06605 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25957 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g40330 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g06900 LAP6 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22586 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c13_9010V3.1 Pp3c13_9010 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g15615 LAP6 EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR012328 Chalcone/stilbene_synt_C 80 114
IPR012328 Chalcone/stilbene_synt_C 115 187
IPR001099 Chalcone/stilbene_synt_N 9 70
No external refs found!