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  5. Pp3c19_2470V3.1

Pp3c19_2470V3.1 (Pp3c19_2470)


Aliases : Pp3c19_2470

Description : NB-ARC domain-containing disease resistance protein


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_2470V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00050p00210650 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g63350... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00178260 RFL1,... No description available 0.02 OrthoFinder output from all 47 species
AT1G12280 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 OrthoFinder output from all 47 species
AT1G63360 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Cba_g57175 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_01077 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_01300 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Gb_04767 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_08717 RPS5 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_12853 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_12854 RPS2 Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_12858 RPS2 Putative disease resistance protein At3g14460... 0.01 OrthoFinder output from all 47 species
Gb_15877 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_16713 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_22369 RPS5 Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_22529 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_29143 No alias Disease resistance protein At4g27190 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g43440.1 RPS2, LOC_Os04g43440 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g14060.1 LOC_Os09g14060 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10265639g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_168565g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_354579g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_355252g0010 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_378728g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_562728g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_81901g0010 No alias Probable disease resistance protein At5g63020... 0.02 OrthoFinder output from all 47 species
MA_9565901g0010 No alias Probable disease resistance protein At1g61310... 0.03 OrthoFinder output from all 47 species
Nbi_g11794 ADR1-L2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g33524 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g37325 RFL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c19_2480V3.1 Pp3c19_2480 NB-ARC domain-containing disease resistance protein 0.02 OrthoFinder output from all 47 species
Solyc06g048910.2.1 Solyc06g048910 Disease resistance protein At4g27190 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Solyc11g007790.1.1 Solyc11g007790 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 16 73
No external refs found!