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  5. Pp3c19_3570V3.1

Pp3c19_3570V3.1 (Pp3c19_3570)


Aliases : Pp3c19_3570

Description : secE/sec61-gamma protein transport protein


Gene families : OG0005806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_3570V3.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT3G48570 No alias secE/sec61-gamma protein transport protein 0.02 OrthoFinder output from all 47 species
AT5G50460 No alias secE/sec61-gamma protein transport protein 0.04 OrthoFinder output from all 47 species
Adi_g126155 No alias subunit gamma of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
Aspi01Gene69905.t1 Aspi01Gene69905 subunit gamma of co-translational insertion system Sec61... 0.01 OrthoFinder output from all 47 species
Ceric.31G013000.1 Ceric.31G013000 subunit gamma of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000980.10 No alias Protein translocation.endoplasmic... 0.02 OrthoFinder output from all 47 species
GSVIVT01033084001 No alias Protein translocation.endoplasmic... 0.02 OrthoFinder output from all 47 species
LOC_Os02g08180.1 LOC_Os02g08180 subunit gamma of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
LOC_Os06g44374.1 LOC_Os06g44374 subunit gamma of co-translational insertion system Sec61... 0.05 OrthoFinder output from all 47 species
MA_10431451g0010 No alias subunit gamma of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
Mp3g00820.1 No alias subunit gamma of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015780 No alias subunit gamma of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
Smo228208 No alias Protein translocation.endoplasmic... 0.03 OrthoFinder output from all 47 species
Tin_g23459 No alias subunit gamma of co-translational insertion system Sec61... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0034998 oligosaccharyltransferase I complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001901 Translocase_SecE/Sec61-g 12 65
No external refs found!