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  5. Pp3c19_8830V3.1

Pp3c19_8830V3.1 (UBQ10, Pp3c19_8830)


Aliases : UBQ10, Pp3c19_8830

Description : polyubiquitin 10


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_8830V3.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g21986 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g35419 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os06g46770.2 UBQ10, LOC_Os06g46770 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
Msp_g02683 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08072 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g13238 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g24678 UBQ14 UBQ ubiquiTin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46316 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 155 226
IPR000626 Ubiquitin-like_dom 307 378
IPR000626 Ubiquitin-like_dom 3 74
IPR000626 Ubiquitin-like_dom 231 302
IPR000626 Ubiquitin-like_dom 383 454
No external refs found!