Aliases : Pp3c19_9760
Description : RNA-binding (RRM/RBD/RNP motifs) family protein
Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00138p00027500 | evm_27.TU.AmTr_v1... | Binding partner of ACD11 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Als_g11474 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g010663 | No alias | not classified & original description: CDS=112-876 | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01022464001 | No alias | Binding partner of ACD11 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g53770.1 | LOC_Os03g53770 | Binding partner of ACD11 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13573 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07946 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g30095 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g25198 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0164.g024053 | No alias | not classified & original description: CDS=195-929 | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g07450 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Solyc08g076530.3.1 | Solyc08g076530 | Binding partner of ACD11 1 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e012169_P002 | Zm00001e012169 | Binding partner of ACD11 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 12 | 72 |
| No external refs found! |
