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  5. Pp3c1_21950V3.1

Pp3c1_21950V3.1 (ATSUG1, RPT6A, Pp3c1_21950)


Aliases : ATSUG1, RPT6A, Pp3c1_21950

Description : regulatory particle triple-A ATPase 6A


Gene families : OG0004338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_21950V3.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00217520 ATSUG1, RPT6A,... Protein degradation.26S proteasome.regulatory... 0.01 OrthoFinder output from all 47 species
AT5G19990 ATSUG1, RPT6A regulatory particle triple-A ATPase 6A 0.02 OrthoFinder output from all 47 species
AT5G20000 No alias AAA-type ATPase family protein 0.02 OrthoFinder output from all 47 species
Ceric.37G056200.1 ATSUG1, RPT6A,... regulatory component *(RPT6) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000792.28 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Cre04.g216600 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Dcu_g04554 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
GSVIVT01035767001 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Gb_08346 ATSUG1, RPT6A regulatory component RPT6 of 26S proteasome 0.04 OrthoFinder output from all 47 species
LOC_Os02g11050.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp1g04290.1 ATSUG1, RPT6A regulatory component RPT6 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Msp_g06734 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Solyc05g018570.3.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e014515_P001 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e024980_P001 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB_C 71 126
IPR003959 ATPase_AAA_core 184 317
IPR041569 AAA_lid_3 341 383
No external refs found!