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  5. Pp3c1_33600V3.1

Pp3c1_33600V3.1 (Pp3c1_33600)


Aliases : Pp3c1_33600

Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_33600V3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g022676 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g06314 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g55502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 73
IPR000504 RRM_dom 110 168
No external refs found!