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  5. Pp3c1_4400V3.1

Pp3c1_4400V3.1 (Pp3c1_4400)


Aliases : Pp3c1_4400

Description : ATPase, F0/V0 complex, subunit C protein


Gene families : OG0000979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000979_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_4400V3.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Als_g58052 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.02 OrthoFinder output from all 47 species
Aob_g06964 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.03 OrthoFinder output from all 47 species
Aop_g03676 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.01 OrthoFinder output from all 47 species
Aop_g49610 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01008858001 No alias Solute transport.primary active transport.V-type ATPase... 0.02 OrthoFinder output from all 47 species
GSVIVT01009832001 No alias Solute transport.primary active transport.V-type ATPase... 0.02 OrthoFinder output from all 47 species
GSVIVT01024165001 No alias Solute transport.primary active transport.V-type ATPase... 0.03 OrthoFinder output from all 47 species
Len_g30882 AVA-2PE, AVA-P2, ATVHA-C2 subunit c of V-type ATPase membrane V0 subcomplex &... 0.01 OrthoFinder output from all 47 species
Lfl_g07983 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.02 OrthoFinder output from all 47 species
Mp5g20810.1 No alias subunit c of V-type ATPase membrane V0 subcomplex 0.02 OrthoFinder output from all 47 species
Ppi_g23670 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019907 AVA-2PE, AVA-P2, ATVHA-C2 subunit c of V-type ATPase membrane V0 subcomplex &... 0.01 OrthoFinder output from all 47 species
Spa_g41557 No alias subunit c of V-type ATPase membrane V0 subcomplex &... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015078 proton transmembrane transporter activity IEA Interproscan
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEA Interproscan
BP GO:1902600 proton transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR002379 ATPase_proteolipid_c-like_dom 99 157
IPR002379 ATPase_proteolipid_c-like_dom 19 78
No external refs found!