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  5. Pp3c1_7210V3.1

Pp3c1_7210V3.1 (ABCB19, ATABCB19,...)


Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19, Pp3c1_7210

Description : ATP binding cassette subfamily B19


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_7210V3.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00109790 PGP11,... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00048p00046670 PGP2,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
AMTR_s00076p00195870 PGP1, ABCB1,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
AT2G47000 ATPGP4, PGP4, ABCB4, MDR4 ATP binding cassette subfamily B4 0.01 OrthoFinder output from all 47 species
AT3G28345 No alias ABC transporter family protein 0.01 OrthoFinder output from all 47 species
AT4G18050 PGP9 P-glycoprotein 9 0.01 OrthoFinder output from all 47 species
AT4G25960 PGP2 P-glycoprotein 2 0.01 OrthoFinder output from all 47 species
Adi_g056650 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080508 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g29408 PGP18 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g18810 PGP2 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g18500 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24344 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22138 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g22258 PGP2 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g68609 PGP13 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene32170.t1 ABCB14,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46501.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene46501.t2 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012029 ABCB19,... subfamily ABCB transporter & original description: CDS=121-4035 0.01 OrthoFinder output from all 47 species
Azfi_s2496.g111845 ABCB19,... subfamily ABCB transporter & original description: CDS=142-3066 0.01 OrthoFinder output from all 47 species
Dac_g05507 ABCB19,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g06724 PGP2 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g23401 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g35376 PGP21 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g38855 PGP11 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g45466 PGP11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03201 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g40826 PGP2 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g02960 PGP13 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01021365001 PGP9 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Gb_07563 ABCB19,... subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Gb_08706 No alias subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Gb_32125 PGP11 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Gb_33057 ABCB19,... subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
LOC_Os01g18670.1 PGP21, LOC_Os01g18670 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
LOC_Os05g04610.1 ATPGP4, PGP4,... subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
LOC_Os05g47500.1 PGP9, LOC_Os05g47500 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Len_g02924 PGP2 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Len_g49095 PGP11 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_126766g0010 PGP2 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Mp2g02910.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Mp2g06270.1 PGP20 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Msp_g31505 PGP11 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g32847 PGP21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13949 PGP12 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g29607 No alias subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g33236 ABCB19,... ABC-B-type transporter *(AMN3) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g47037 PGP11 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g47038 PGP9 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g60650 PGP21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05161 PGP20 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006153 PGP11 subfamily ABCB transporter & original description: CDS=261-4235 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012919 ABCB19,... subfamily ABCB transporter & original description: CDS=118-4143 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017905 PGP11 not classified & original description: CDS=139-861 0.01 OrthoFinder output from all 47 species
Sam_g03721 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g34273 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo419451 No alias Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Smo75690 ABCB19,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Solyc03g005860.4.1 PGP11, Solyc03g005860 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Solyc11g067300.2.1 PGP11, Solyc11g067300 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Tin_g06699 PGP2 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g11244 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 443 591
IPR003439 ABC_transporter-like_ATP-bd 1077 1225
IPR011527 ABC1_TM_dom 736 1007
IPR011527 ABC1_TM_dom 103 372
No external refs found!