Pp3c20_1430V3.1 (RPT1A, Pp3c20_1430)

Aliases : RPT1A, Pp3c20_1430

Description : regulatory particle triple-A 1A

Gene families : OG0004346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004346_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c20_1430V3.1
Cluster	HCCA: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021464.16	RPT1A	Protein degradation.26S proteasome.regulatory...	0.02	OrthoFinder output from all 47 species
Cre14.g625400	RPT1A	Protein degradation.26S proteasome.regulatory...	0.02	OrthoFinder output from all 47 species
Dcu_g01171	RPT1A	regulatory component *(RPT1) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Gb_11942	RPT1A	regulatory component RPT1 of 26S proteasome	0.02	OrthoFinder output from all 47 species
LOC_Os02g54340.1	RPT1A, LOC_Os02g54340	regulatory component RPT1 of 26S proteasome	0.02	OrthoFinder output from all 47 species
LOC_Os06g09290.2	RPT1A, LOC_Os06g09290	regulatory component RPT1 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Mp2g04840.1	RPT1A	regulatory component RPT1 of 26S proteasome	0.05	OrthoFinder output from all 47 species
Msp_g08271	RPT1A	regulatory component *(RPT1) of 26S proteasome &...	0.01	OrthoFinder output from all 47 species
Smo146742	RPT1A	Protein degradation.26S proteasome.regulatory...	0.02	OrthoFinder output from all 47 species
Zm00001e023743_P001	RPT1A, Zm00001e023743	regulatory component RPT1 of 26S proteasome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	359	403
IPR003959	ATPase_AAA_core	204	336

External Links

No external refs found!