1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c20_22230V3.1

Pp3c20_22230V3.1 (Pp3c20_22230)


Aliases : Pp3c20_22230

Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_22230V3.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Adi_g036665 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g059180 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g059530 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g075885 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g082153 FTSH12, EMB36,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g19011 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g19727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09069 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g27334 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g40952 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34778.t1 Aspi01Gene34778 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45474.t1 Aspi01Gene45474 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45500.t1 LAZ5, Aspi01Gene45500 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45501.t1 LAZ5, Aspi01Gene45501 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene45502.t1 Aspi01Gene45502 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48759.t1 Aspi01Gene48759 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48832.t1 Aspi01Gene48832 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48836.t1 Aspi01Gene48836 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60107.t1 Aspi01Gene60107 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72785 LAZ5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.15G016100.1 Ceric.15G016100 not classified & original description: pacid=50640408... 0.02 OrthoFinder output from all 47 species
Ceric.1Z249000.1 RLM3, Ceric.1Z249000 not classified & original description: pacid=50576849... 0.01 OrthoFinder output from all 47 species
Dcu_g12869 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g16279 RPS4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g34176 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g51801 LAZ5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001790001 No alias External stimuli response.biotic stress.pathogen... 0.01 OrthoFinder output from all 47 species
Gb_03482 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_12366 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_12483 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_12959 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.01 OrthoFinder output from all 47 species
Gb_14266 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_14945 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Gb_16090 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_25096 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_27866 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Gb_36919 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_397657g0020 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g12589 LAZ5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12596 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g23825 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g26575 RPP13 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g40888 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g43970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52108 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pp3c10_20790V3.1 Pp3c10_20790 disease resistance protein (TIR-NBS-LRR class) 0.08 OrthoFinder output from all 47 species
Pp3c10_4170V3.1 Pp3c10_4170 disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Pp3c16_21740V3.1 Pp3c16_21740 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c4_30410V3.1 Pp3c4_30410 Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Solyc01g102930.1.1 Solyc01g102930 no description available(sp|f4jt78|rpp2a_arath : 145.0) 0.01 OrthoFinder output from all 47 species
Solyc07g055380.1.1 Solyc07g055380 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Spa_g48976 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 2 111
No external refs found!