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  5. Pp3c21_11130V3.1

Pp3c21_11130V3.1 (CP12-1, CP12, Pp3c21_11130)


Aliases : CP12-1, CP12, Pp3c21_11130

Description : CP12 domain-containing protein 2


Gene families : OG0002170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_11130V3.1
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00175560 CP12, CP12-2,... Calvin cycle protein CP12-2, chloroplastic... 0.01 OrthoFinder output from all 47 species
Adi_g048511 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Ala_g00257 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.01 OrthoFinder output from all 47 species
Ceric.31G034600.1 CP12, CP12-2,... regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Cre08.g380250 CP12-1, CP12 Calvin cycle protein CP12, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dac_g32821 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Dcu_g34639 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Dcu_g40442 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Dde_g03082 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.01 OrthoFinder output from all 47 species
LOC_Os01g19740.1 CP12-1, CP12,... Calvin cycle protein CP12-2, chloroplastic... 0.01 OrthoFinder output from all 47 species
LOC_Os03g19380.1 CP12-1, CP12,... Calvin cycle protein CP12-2, chloroplastic... 0.01 OrthoFinder output from all 47 species
MA_524595g0010 CP12, CP12-2 Calvin cycle protein CP12-2, chloroplastic... 0.01 OrthoFinder output from all 47 species
Mp2g10550.1 CP12-3 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g10264 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Ore_g08879 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.01 OrthoFinder output from all 47 species
Ore_g22166 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.01 OrthoFinder output from all 47 species
Pir_g14932 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Pnu_g33458 No alias regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Ppi_g40122 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.01 OrthoFinder output from all 47 species
Ppi_g53465 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.01 OrthoFinder output from all 47 species
Smo105078 CP12-1, CP12 Calvin cycle protein CP12-1, chloroplastic... 0.01 OrthoFinder output from all 47 species
Solyc01g079470.4.1 CP12-1, CP12,... no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc06g009630.1.1 CP12, CP12-2,... Calvin cycle protein CP12-2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g00117 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR003823 CP12_dom 61 122
No external refs found!