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  5. Pp3c21_21540V3.1

Pp3c21_21540V3.1 (Pp3c21_21540)


Aliases : Pp3c21_21540

Description : ribosomal protein S27


Gene families : OG0001813 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001813_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_21540V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00194290 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
AT3G61110 ARS27A, RS27A ribosomal protein S27 0.02 OrthoFinder output from all 47 species
AT5G47930 No alias Zinc-binding ribosomal protein family protein 0.02 OrthoFinder output from all 47 species
Ceric.26G067400.1 ARS27A, RS27A,... component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cre12.g529400 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Dde_g07575 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os04g32710.1 LOC_Os04g32710 component RPS27 of SSU proteome 0.03 OrthoFinder output from all 47 species
Lfl_g15035 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
MA_54625g0010 ARS27A, RS27A component RPS27 of SSU proteome 0.01 OrthoFinder output from all 47 species
MA_87055g0010 ARS27A, RS27A component RPS27 of SSU proteome 0.01 OrthoFinder output from all 47 species
Pp3c2_20540V3.1 ARS27A, RS27A,... ribosomal protein S27 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018215 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Spa_g36862 No alias component *(eS27) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Tin_g24199 ARS27A, RS27A component *(eS27) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27 30 84
No external refs found!