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  5. Pp3c22_9940V3.1

Pp3c22_9940V3.1 (RNA_POL_II_LSRNA_POL_I...)


Aliases : RNA_POL_II_LSRNA_POL_II_LS, NRPB1, RPB1, RNA_POL_II_LS, Pp3c22_9940

Description : RNA polymerase II large subunit


Gene families : OG0011134 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_9940V3.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Pp3c14_4000V3.1 Pp3c14_4000 RNA polymerase II large subunit 0.02 OrthoFinder output from all 47 species
Pp3c24_10300V3.1 Pp3c24_10300 RNA polymerase II large subunit 0.03 OrthoFinder output from all 47 species
Pp3c4_24940V3.1 Pp3c4_24940 RNA polymerase II large subunit 0.02 OrthoFinder output from all 47 species
Pp3c6_15700V3.1 Pp3c6_15700 nuclear RNA polymerase C1 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006313 transposition, DNA-mediated IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0032196 transposition IEP HCCA
InterPro domains Description Start Stop
IPR000722 RNA_pol_asu 1 55
No external refs found!