Pp3c23_11730V3.1 (ATCLC-F, CLCF, CLC-F,...)

Aliases : ATCLC-F, CLCF, CLC-F, Pp3c23_11730

Description : chloride channel F

Gene families : OG0002475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002475_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c23_11730V3.1
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
Cba_g15515	CLC-E, ATCLC-E, CLCE	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Cre01.g037150	ATCLC-F, CLCF, CLC-F	Solute transport.carrier-mediated transport.CLC anion...	0.01	OrthoFinder output from all 47 species
Len_g10338	CLC-E, ATCLC-E, CLCE	anion channel / anion:proton antiporter *(CLC) &...	0.01	OrthoFinder output from all 47 species
Msp_g14773	CLC-E, ATCLC-E, CLCE	anion channel / anion:proton antiporter *(CLC) &...	0.01	OrthoFinder output from all 47 species
Tin_g20986	CLC-E, ATCLC-E, CLCE	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Zm00001e022936_P001	ATCLC-F, CLCF,...	anion channel / anion:proton antiporter (CLC)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	Interproscan
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	None	Extended
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020683	DUF3447	181	272
IPR023780	Chromo_domain	370	413
IPR023780	Chromo_domain	319	363
IPR001807	Cl-channel_volt-gated	752	1078
IPR000644	CBS_dom	1147	1201

External Links

No external refs found!

Pp3c23_11730V3.1 (ATCLC-F, CLCF, CLC-F,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation