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  5. Pp3c23_8550V3.1

Pp3c23_8550V3.1 (ELIP, ELIP1, Pp3c23_8550)


Aliases : ELIP, ELIP1, Pp3c23_8550

Description : Chlorophyll A-B binding family protein


Gene families : OG0000684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c23_8550V3.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Ceric.10G073000.1 ELIP, ELIP1,... LHC-related protein *(ELIP) & original description:... 0.02 OrthoFinder output from all 47 species
Mp3g12530.1 ELIP, ELIP1 ELIP LHC-related protein 0.01 OrthoFinder output from all 47 species
Mp3g12540.1 ELIP, ELIP1 ELIP LHC-related protein 0.01 OrthoFinder output from all 47 species
Mp3g12550.1 ELIP, ELIP1 ELIP LHC-related protein 0.03 OrthoFinder output from all 47 species
Mp3g12560.1 ELIP, ELIP1 ELIP LHC-related protein 0.03 OrthoFinder output from all 47 species
Mp3g15970.1 ELIP, ELIP1 ELIP LHC-related protein 0.04 OrthoFinder output from all 47 species
Mp4g18550.1 No alias ELIP LHC-related protein 0.03 OrthoFinder output from all 47 species
Mp4g18560.1 No alias ELIP LHC-related protein 0.03 OrthoFinder output from all 47 species
Mp4g18570.1 No alias ELIP LHC-related protein 0.01 OrthoFinder output from all 47 species
Mp4g18610.1 No alias ELIP LHC-related protein 0.02 OrthoFinder output from all 47 species
Mp4g18620.1 No alias ELIP LHC-related protein 0.02 OrthoFinder output from all 47 species
Mp4g18630.1 No alias ELIP LHC-related protein 0.03 OrthoFinder output from all 47 species
Mp6g20750.1 ELIP, ELIP1 ELIP LHC-related protein 0.04 OrthoFinder output from all 47 species
Mp6g20760.1 ELIP, ELIP1 ELIP LHC-related protein 0.04 OrthoFinder output from all 47 species
Mp6g20770.1 ELIP, ELIP1 ELIP LHC-related protein 0.04 OrthoFinder output from all 47 species
Nbi_g24690 No alias LHC-related protein *(ELIP) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 110 202
No external refs found!