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  5. Pp3c27_6210V3.1

Pp3c27_6210V3.1 (Pp3c27_6210)


Aliases : Pp3c27_6210

Description : No annotation


Gene families : OG0000220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c27_6210V3.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Aev_g45777 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene46600.t1 Aspi01Gene46600 heavy chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Ceric.1Z068500.1 Ceric.1Z068500 heavy chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Ceric.25G018200.1 Ceric.25G018200 not classified & original description: pacid=50594702... 0.01 OrthoFinder output from all 47 species
Ceric.25G028800.1 Ceric.25G028800 heavy chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000142.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000142.7 No alias Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000169.13 No alias Dynein-1-beta heavy chain, flagellar inner arm I1... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.64 No alias Dynein-1-alpha heavy chain, flagellar inner arm I1... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000828.12 No alias Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001206.27 No alias Dynein-1-alpha heavy chain, flagellar inner arm I1... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001206.30 No alias Dynein-1-beta heavy chain, flagellar inner arm I1... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020684.47 ACBP4 Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021017.28 No alias Dynein gamma chain, flagellar outer arm OS=Chlamydomonas... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021350.41 No alias Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.30 No alias Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder output from all 47 species
Cre02.g141606 No alias Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder output from all 47 species
Cre03.g145127 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cre09.g392282 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cre09.g403800 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cre11.g476050 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cre12.g484250 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cre14.g624950 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cre14.g627576 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cre16.g685450 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Mp1g06980.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.01 OrthoFinder output from all 47 species
Mp2g07870.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.01 OrthoFinder output from all 47 species
Pnu_g23794 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015235 No alias heavy chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Smo76047 No alias Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
InterPro domains Description Start Stop
IPR041228 Dynein_C 3509 3817
IPR013602 Dynein_heavy_linker 588 992
IPR035706 AAA_9 2753 2973
IPR041589 DNAH3_AAA_lid_1 1960 2038
IPR041466 Dynein_AAA5_ext 1612 1739
IPR004273 Dynein_heavy_D6_P-loop 3218 3338
IPR024743 Dynein_HC_stalk 2378 2721
IPR035699 AAA_6 1120 1446
IPR041658 AAA_lid_11 3339 3503
IPR024317 Dynein_heavy_chain_D4_dom 2105 2364
No external refs found!