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  5. Pp3c2_14800V3.1

Pp3c2_14800V3.1 (Pp3c2_14800)


Aliases : Pp3c2_14800

Description : Ribosomal protein S25 family protein


Gene families : OG0000493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_14800V3.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT2G21580 No alias Ribosomal protein S25 family protein 0.01 OrthoFinder output from all 47 species
AT4G39200 No alias Ribosomal protein S25 family protein 0.01 OrthoFinder output from all 47 species
Als_g08447 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ceric.10G003600.1 Ceric.10G003600 component *(eS25) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Cre08.g382500 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Dac_g24943 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
GSVIVT01000974001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01010721001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
LOC_Os08g44480.1 LOC_Os08g44480 component RPS25 of SSU proteome 0.01 OrthoFinder output from all 47 species
LOC_Os09g39540.1 LOC_Os09g39540 component RPS25 of SSU proteome 0.01 OrthoFinder output from all 47 species
LOC_Os11g05562.1 LOC_Os11g05562 component RPS25 of SSU proteome 0.01 OrthoFinder output from all 47 species
Lfl_g05125 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g63087 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Pnu_g15384 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g23162 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g41630 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Smo172404 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Zm00001e022058_P001 Zm00001e022058 component RPS25 of SSU proteome 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR004977 Ribosomal_S25 5 104
No external refs found!