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  5. Pp3c2_26760V3.1

Pp3c2_26760V3.1 (Pp3c2_26760)


Aliases : Pp3c2_26760

Description : acyl-CoA binding protein 2


Gene families : OG0001126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001126_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_26760V3.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT3G23280 XBAT35 XB3 ortholog 5 in Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ala_g13982 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g16573 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene16279.t1 XBAT35, Aspi01Gene16279 E3 ubiquitin ligase *(XBAT3) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene16283.t1 XBAT35, Aspi01Gene16283 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Mp1g29560.1 XBAT35 RING-HC-class E3 ligase 0.01 OrthoFinder output from all 47 species
Msp_g01157 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g39906 No alias E3 ubiquitin ligase *(XBAT3) & original description: none 0.01 OrthoFinder output from all 47 species
Smo141633 XBAT35 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 18 107
No external refs found!