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  5. Pp3c2_30660V3.1

Pp3c2_30660V3.1 (Pp3c2_30660)


Aliases : Pp3c2_30660

Description : NADH dehydrogenase subunit 4


Gene families : OG0004828 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_30660V3.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
ATMG00580 NAD4 NADH dehydrogenase subunit 4 0.02 OrthoFinder output from all 47 species
LOC_Os12g34094.1 NAD4, LOC_Os12g34094 NADH-ubiquinone oxidoreductase chain 4 OS=Triticum... 0.01 OrthoFinder output from all 47 species
Nbi_g17169 NAD4 component *(ND4/NQO13) of NADH dehydrogenase proton... 0.02 OrthoFinder output from all 47 species
Solyc00g013180.1.1 NAD4, Solyc00g013180 NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.02 OrthoFinder output from all 47 species
Solyc00g500171.1.1 NAD4, Solyc00g500171 NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc00g500172.1.1 NAD4, Solyc00g500172 NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.03 OrthoFinder output from all 47 species
Solyc00g500188.1.1 NAD4, Solyc00g500188 NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc00g500189.1.1 NAD4, Solyc00g500189 NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.03 OrthoFinder output from all 47 species
Solyc00g500252.1.1 NAD4, Solyc00g500252 NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc00g500253.1.1 NAD4, Solyc00g500253 NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.03 OrthoFinder output from all 47 species
Solyc10g061990.3.1 NAD4, Solyc10g061990 NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.02 OrthoFinder output from all 47 species
Spa_g54446 NAD4 component *(ND4/NQO13) of NADH dehydrogenase proton... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001750 ND/Mrp_mem 8 78
No external refs found!