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  5. Pp3c2_36220V3.1

Pp3c2_36220V3.1 (LHCB2.3, LHCB2,...)


Aliases : LHCB2.3, LHCB2, LHCB2.4, Pp3c2_36220

Description : photosystem II light harvesting complex gene 2.1


Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_36220V3.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Als_g04751 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Als_g12306 LHCB5 component *(LHCb5) of LHC-II complex & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g07011 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene25498.t1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53662.t1 LHCB2.3, LHCB2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene62512.t1 LHCB2.1, LHCB2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18249 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Gb_05837 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g05530.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g05980.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Mp7g06720.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g06790.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 47 species
Mp7g09340.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 47 species
Pp3c5_7150V3.1 LHCB2.3, LHCB2,... photosystem II light harvesting complex gene 2.1 0.02 OrthoFinder output from all 47 species
Solyc03g005760.1.1 LHCB1.3, CAB140,... component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 68 233
No external refs found!