Aliases : Pp3c3_5040
Description : C2H2 and C2HC zinc fingers superfamily protein
Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c3_5040V3.1 | |
| Cluster | HCCA: Cluster_104 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G66140 | ZFP4 | zinc finger protein 4 | 0.01 | OrthoFinder output from all 47 species | |
| AT1G67030 | ZFP6 | zinc finger protein 6 | 0.01 | OrthoFinder output from all 47 species | |
| AT1G68360 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT3G09290 | TAC1 | telomerase activator1 | 0.01 | OrthoFinder output from all 47 species | |
| AT3G23130 | SUP, FLO10, FON1 | C2H2 and C2HC zinc fingers superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT5G10970 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT5G25160 | ZFP3 | zinc finger protein 3 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G57520 | ATZFP2, ZFP2 | zinc finger protein 2 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g117519 | ZFP4 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g17619 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g20041 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g26427 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene22629.t1 | Aspi01Gene22629 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene22630.t1 | Aspi01Gene22630 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene32392.t1 | Aspi01Gene32392 | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene60683.t1 | Aspi01Gene60683 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene60689.t1 | Aspi01Gene60689 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0014.g013503 | GIS2 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0144.g051613 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g01172 | ZFP3 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g00776 | ZFP3 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009401001 | ZFP7 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01013168001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01031007001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_27734 | ZFP10, ATZFP10 | Zinc finger protein 10 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g05490.1 | LOC_Os03g05490 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os03g11680.1 | ZFP8, LOC_Os03g11680 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os08g44190.1 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g26200.1 | ZFP3, LOC_Os09g26200 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Len_g48059 | ZFP1, ATZFP1 | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g23357 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_113057g0020 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| MA_2800g0010 | No alias | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| MA_424g0010 | No alias | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g23440.1 | ZFP6 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g25653 | JGL, NUB | transcriptional regulator *(JAG/NUB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g06363 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g33080 | ZFP5 | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0125.g021695 | RAB, RBE | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g068390.1.1 | Solyc06g068390 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Solyc10g049870.1.1 | ZFP7, Solyc10g049870 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12736 | ZFP5 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009853_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e009854_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e011910_P001 | Zm00001e011910 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e017991_P001 | ZFP7, Zm00001e017991 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e020926_P001 | Zm00001e020926 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e030783_P001 | ZFP8, Zm00001e030783 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e032639_P001 | ZFP10, ATZFP10,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036220_P001 | ZFP8, Zm00001e036220 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e037946_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005685 | U1 snRNP | IEP | HCCA |
| BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
