Pp3c4_20623V3.1 (ARFA1E, ATARFA1E, Pp3c4_20623)

Aliases : ARFA1E, ATARFA1E, Pp3c4_20623

Description : ADP-ribosylation factor A1E

Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c4_20623V3.1
Cluster	HCCA: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method
AT1G10630	ATARFA1F, ARFA1F	ADP-ribosylation factor A1F	0.02	OrthoFinder output from all 47 species
AT1G23490	ATARF1, ARF1,...	ADP-ribosylation factor 1	0.02	OrthoFinder output from all 47 species
AT1G70490	ARFA1D, ATARFA1D	Ras-related small GTP-binding family protein	0.02	OrthoFinder output from all 47 species
AT2G47170	ARF1A1C	Ras-related small GTP-binding family protein	0.02	OrthoFinder output from all 47 species
Adi_g048023	ATARFA1F, ARFA1F	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g051592	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g051593	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g098748	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g112037	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g12669	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g50096	ATARFA1B, ARFA1B	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os03g59740.1	ATARFA1B,...	ARF-GTPase	0.01	OrthoFinder output from all 47 species
Lfl_g05275	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.01	OrthoFinder output from all 47 species
Mp3g13920.1	ATARFA1F, ARFA1F	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Sam_g01985	No alias	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Smo140818	ATARFA1B, ARFA1B	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.01	OrthoFinder output from all 47 species
Spa_g29323	ATARFA1F, ARFA1F	not classified & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	5	177

External Links

No external refs found!

Pp3c4_20623V3.1 (ARFA1E, ATARFA1E, Pp3c4_20623)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation