Pp3c4_21050V3.1 (Pp3c4_21050)


Aliases : Pp3c4_21050

Description : disease resistance protein (TIR-NBS-LRR class)


Gene families : OG0015498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015498_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_21050V3.1

Target Alias Description ECC score Gene Family Method Actions
Pp3c18_6230V3.1 Pp3c18_6230 Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Pp3c21_16759V3.1 Pp3c21_16759 Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Pp3c21_17690V3.1 Pp3c21_17690 disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from all 47 species
Pp3c23_20700V3.1 Pp3c23_20700 disease resistance protein (TIR-NBS-LRR class), putative 0.03 OrthoFinder output from all 47 species
Pp3c27_6810V3.1 Pp3c27_6810 disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!