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  5. Pp3c4_26780V3.1

Pp3c4_26780V3.1 (AGO9, Pp3c4_26780)


Aliases : AGO9, Pp3c4_26780

Description : Argonaute family protein


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_26780V3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g016084 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g17789 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0095.g043652 AGO1 not classified & original description: CDS=139-2811 0.03 OrthoFinder output from all 47 species
Cre02.g141050 AGO1 Protein argonaute PNH1 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Cre04.g214250 AGO1 Protein argonaute 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ore_g11818 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g09278 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g51306 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003100 PAZ_dom 313 427
IPR032474 Argonaute_N 69 232
IPR032472 ArgoL2 437 481
IPR003165 Piwi 578 883
IPR014811 ArgoL1 244 291
No external refs found!