Aliases : Pp3c4_7160
Description : Phototropic-responsive NPH3 family protein
Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00135p00069650 | RPT3, NPH3,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G67900 | No alias | Phototropic-responsive NPH3 family protein | 0.01 | OrthoFinder output from all 47 species | |
| AT5G10250 | DOT3 | Phototropic-responsive NPH3 family protein | 0.01 | OrthoFinder output from all 47 species | |
| AT5G64330 | RPT3, NPH3, JK218 | Phototropic-responsive NPH3 family protein | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g21241 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g08124 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g46679 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene59329.t1 | RPT3, NPH3,... | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g07235 | NPY2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g07700 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.01 | OrthoFinder output from all 47 species | |
| MA_52004g0010 | RPT3, NPH3, JK218 | component NPH3 of CUL3-BTB E3 ubiquitin ligase complex | 0.01 | OrthoFinder output from all 47 species | |
| MA_83456g0010 | NPY2 | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c4_7202V3.1 | NPY2, Pp3c4_7202 | Phototropic-responsive NPH3 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38846 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc01g107180.3.1 | NPY2, Solyc01g107180 | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g092480.4.1 | NPY2, Solyc02g092480 | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g16161 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g01198 | RPT3, NPH3, JK218 | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquiTin... | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g13146 | No alias | substrate adaptor of CUL3-based E3 ubiquiTin ligase... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027356 | NPH3_dom | 1 | 134 |
| No external refs found! |
